WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:AC7.2c.1 Sequence Name  AC7.2c.1
Length (nt)  2281   Chromosome Location  IV: 5127041-5152491
Chromosome . Primary Identifier  IV Chromosome Location . Start  5127041
Chromosome Location . End  5152491 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC7.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004929 soc-2 AC7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:AC7.2c AC7.2c 1896   IV: 5127402-5127622

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:AC7.2c.1 5127041 5152491 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121452   582   IV: 5127041-5127622 Caenorhabditis elegans
Exon121460   351   IV: 5129027-5129377 Caenorhabditis elegans
Exon121466   220   IV: 5129749-5129968 Caenorhabditis elegans
Exon121470   203   IV: 5130433-5130635 Caenorhabditis elegans
Exon121475   217   IV: 5131299-5131515 Caenorhabditis elegans
Exon121480   153   IV: 5131763-5131915 Caenorhabditis elegans
Exon121484   132   IV: 5132105-5132236 Caenorhabditis elegans
Exon121525   138   IV: 5144715-5144852 Caenorhabditis elegans
Exon121540   285   IV: 5152207-5152491 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:AC7.2c.1 5127041 5152491 -1

1 Sequence

Length
2281

1 Sequence Ontology Term

Identifier Name Description
transcript