Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:AC7.39 | AC7.39 |
21
 |
IV: 5123164-5123184 |
Other
10 Allele
| Public Name |
|---|
| gk964500 |
| gk963722 |
| gk963417 |
| gk963867 |
| gk963150 |
| gk963416 |
| WBVar02122597 |
| WBVar02124697 |
| WBVar02123809 |
| WBVar02123810 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00169384 | 5123164 | 5123184 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_5123185..5123893 | 709 | IV: 5123185-5123893 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly decreased expression in shk-1(yum1003) comparing to in N2 animals. | DESeq2 v1.36.0, fold change > 2, FDR < 0.05. | WBPaper00067803:shk-1(yum1003)_downregulated | |
| Fungi infection: Fusarium oxysporum | Transcripts that showed significantly altered expression after infected by fungi Fusarium oxysporum from 0 t0 48 hours. | The Benjamini and Hochberg approach was used to adjust the resulting P-values for controlling the false-discovery rate. The transcripts having a false-discovery rate of < 0.05 were considered as differentially expressed. | WBPaper00053368:F.oxysporum_regulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_5122096..5123163 | 1068 | IV: 5122096-5123163 | Caenorhabditis elegans |
