WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28H11.2.1 Sequence Name  T28H11.2.1
Length (nt)  1242   Chromosome Location  IV: 5012541-5014842
Chromosome . Primary Identifier  IV Chromosome Location . Start  5012541
Chromosome Location . End  5014842 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28H11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005638 srm-1 T28H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28H11.2 T28H11.2 996   IV: 5012549-5012752

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28H11.2.1 5012541 5014842 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon121096   212   IV: 5012541-5012752 Caenorhabditis elegans
Exon121097   73   IV: 5012801-5012873 Caenorhabditis elegans
Exon121101   94   IV: 5013156-5013249 Caenorhabditis elegans
Exon121103   388   IV: 5013763-5014150 Caenorhabditis elegans
Exon121104   156   IV: 5014316-5014471 Caenorhabditis elegans
Exon121105   319   IV: 5014524-5014842 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28H11.2.1 5012541 5014842 1

1 Sequence

Length
1242

1 Sequence Ontology Term

Identifier Name Description
transcript