WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.8a.1 Sequence Name  R11E3.8a.1
Length (nt)  2361   Chromosome Location  IV: 4802702-4806586
Chromosome . Primary Identifier  IV Chromosome Location . Start  4802702
Chromosome Location . End  4806586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001058 dpf-5 R11E3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.8a R11E3.8a 2214   IV: 4802831-4802936

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.8a.1 4802702 4806586 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120284   235   IV: 4802702-4802936 Caenorhabditis elegans
Exon120286   404   IV: 4802983-4803386 Caenorhabditis elegans
Exon120288   145   IV: 4803852-4803996 Caenorhabditis elegans
Exon120290   446   IV: 4804045-4804490 Caenorhabditis elegans
Exon120292   510   IV: 4804816-4805325 Caenorhabditis elegans
Exon120295   316   IV: 4805378-4805693 Caenorhabditis elegans
Exon120296   305   IV: 4806282-4806586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.8a.1 4802702 4806586 -1

1 Sequence

Length
2361

1 Sequence Ontology Term

Identifier Name Description
transcript