WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.5b.1 Sequence Name  R11E3.5b.1
Length (nt)  2409   Chromosome Location  IV: 4785129-4788483
Chromosome . Primary Identifier  IV Chromosome Location . Start  4785129
Chromosome Location . End  4788483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003694 nhr-104 R11E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.5b R11E3.5b 729   IV: 4786762-4786950

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5b.1 4785129 4788483 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120202   1822   IV: 4785129-4786950 Caenorhabditis elegans
Exon120217   126   IV: 4787290-4787415 Caenorhabditis elegans
Exon120221   191   IV: 4787470-4787660 Caenorhabditis elegans
Exon120226   66   IV: 4787714-4787779 Caenorhabditis elegans
Exon120229   86   IV: 4787917-4788002 Caenorhabditis elegans
Exon120231   118   IV: 4788366-4788483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5b.1 4785129 4788483 -1

1 Sequence

Length
2409

1 Sequence Ontology Term

Identifier Name Description
transcript