WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.5c.1 Sequence Name  R11E3.5c.1
Length (nt)  1402   Chromosome Location  IV: 4785096-4788692
Chromosome . Primary Identifier  IV Chromosome Location . Start  4785096
Chromosome Location . End  4788692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003694 nhr-104 R11E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.5c R11E3.5c 1095   IV: 4785147-4785248

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5c.1 4785096 4788692 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120201   153   IV: 4785096-4785248 Caenorhabditis elegans
Exon120206   152   IV: 4785299-4785450 Caenorhabditis elegans
Exon120210   116   IV: 4786310-4786425 Caenorhabditis elegans
Exon120214   185   IV: 4786766-4786950 Caenorhabditis elegans
Exon120218   126   IV: 4787290-4787415 Caenorhabditis elegans
Exon120222   191   IV: 4787470-4787660 Caenorhabditis elegans
Exon120227   66   IV: 4787714-4787779 Caenorhabditis elegans
Exon120230   86   IV: 4787917-4788002 Caenorhabditis elegans
Exon120233   327   IV: 4788366-4788692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5c.1 4785096 4788692 -1

1 Sequence

Length
1402

1 Sequence Ontology Term

Identifier Name Description
transcript