WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.5a.1 Sequence Name  R11E3.5a.1
Length (nt)  1531   Chromosome Location  IV: 4784469-4788692
Chromosome . Primary Identifier  IV Chromosome Location . Start  4784469
Chromosome Location . End  4788692 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003694 nhr-104 R11E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.5a R11E3.5a 1188   IV: 4784556-4784653

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5a.1 4784469 4788692 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120198   185   IV: 4784469-4784653 Caenorhabditis elegans
Exon120203   97   IV: 4785152-4785248 Caenorhabditis elegans
Exon120205   152   IV: 4785299-4785450 Caenorhabditis elegans
Exon120209   116   IV: 4786310-4786425 Caenorhabditis elegans
Exon120213   185   IV: 4786766-4786950 Caenorhabditis elegans
Exon120216   126   IV: 4787290-4787415 Caenorhabditis elegans
Exon120220   191   IV: 4787470-4787660 Caenorhabditis elegans
Exon120225   66   IV: 4787714-4787779 Caenorhabditis elegans
Exon120228   86   IV: 4787917-4788002 Caenorhabditis elegans
Exon120232   327   IV: 4788366-4788692 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.5a.1 4784469 4788692 -1

1 Sequence

Length
1531

1 Sequence Ontology Term

Identifier Name Description
transcript