WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11E3.4.1 Sequence Name  R11E3.4.1
Length (nt)  2377   Chromosome Location  IV: 4776364-4780229
Chromosome . Primary Identifier  IV Chromosome Location . Start  4776364
Chromosome Location . End  4780229 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11E3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020006 set-15 R11E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11E3.4 R11E3.4 1836   IV: 4776833-4776922

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.4.1 4776364 4780229 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120173   559   IV: 4776364-4776922 Caenorhabditis elegans
Exon120175   461   IV: 4776994-4777454 Caenorhabditis elegans
Exon120178   205   IV: 4777501-4777705 Caenorhabditis elegans
Exon120181   132   IV: 4777749-4777880 Caenorhabditis elegans
Exon120184   241   IV: 4778055-4778295 Caenorhabditis elegans
Exon120187   311   IV: 4778452-4778762 Caenorhabditis elegans
Exon120190   299   IV: 4779382-4779680 Caenorhabditis elegans
Exon120193   109   IV: 4779987-4780095 Caenorhabditis elegans
Exon120197   60   IV: 4780170-4780229 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R11E3.4.1 4776364 4780229 -1

1 Sequence

Length
2377

1 Sequence Ontology Term

Identifier Name Description
transcript