WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK180.3a.1 Sequence Name  ZK180.3a.1
Length (nt)  1702   Chromosome Location  IV: 4508496-4511309
Chromosome . Primary Identifier  IV Chromosome Location . Start  4508496
Chromosome Location . End  4511309 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK180.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022677 rfth-1 ZK180.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK180.3a ZK180.3a 1569   IV: 4508620-4508769

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK180.3a.1 4508496 4511309 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119471   274   IV: 4508496-4508769 Caenorhabditis elegans
Exon119474   121   IV: 4508820-4508940 Caenorhabditis elegans
Exon119478   511   IV: 4508997-4509507 Caenorhabditis elegans
Exon119481   395   IV: 4510143-4510537 Caenorhabditis elegans
Exon119482   264   IV: 4510601-4510864 Caenorhabditis elegans
Exon119483   86   IV: 4511124-4511209 Caenorhabditis elegans
Exon119484   51   IV: 4511259-4511309 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK180.3a.1 4508496 4511309 -1

1 Sequence

Length
1702

1 Sequence Ontology Term

Identifier Name Description
transcript