WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F36A4.7.1 Sequence Name  F36A4.7.1
Length (nt)  6020   Chromosome Location  IV: 4248070-4258169
Chromosome . Primary Identifier  IV Chromosome Location . Start  4248070
Chromosome Location . End  4258169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A4.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F36A4.7 F36A4.7 5571   IV: 4248188-4248271

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F36A4.7.1 4248070 4258169 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118836   62   IV: 4248070-4248131 Caenorhabditis elegans
Exon118837   84   IV: 4248188-4248271 Caenorhabditis elegans
Exon118838   110   IV: 4248322-4248431 Caenorhabditis elegans
Exon118839   329   IV: 4248529-4248857 Caenorhabditis elegans
Exon118840   721   IV: 4249342-4250062 Caenorhabditis elegans
Exon118841   306   IV: 4250379-4250684 Caenorhabditis elegans
Exon118842   781   IV: 4250991-4251771 Caenorhabditis elegans
Exon118843   414   IV: 4252070-4252483 Caenorhabditis elegans
Exon118844   741   IV: 4252874-4253614 Caenorhabditis elegans
Exon118845   1589   IV: 4254069-4255657 Caenorhabditis elegans
Exon118846   208   IV: 4256060-4256267 Caenorhabditis elegans
Exon118847   186   IV: 4256688-4256873 Caenorhabditis elegans
Exon118848   489   IV: 4257681-4258169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F36A4.7.1 4248070 4258169 1

1 Sequence

Length
6020

1 Sequence Ontology Term

Identifier Name Description
transcript