WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06B9.5a.1 Sequence Name  K06B9.5a.1
Length (nt)  1748   Chromosome Location  IV: 4198973-4204375
Chromosome . Primary Identifier  IV Chromosome Location . Start  4198973
Chromosome Location . End  4204375 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06B9.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003938 pax-2 K06B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06B9.5a K06B9.5a 1056   IV: 4199665-4199855

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K06B9.5a.1 4198973 4204375 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118758   883   IV: 4198973-4199855 Caenorhabditis elegans
Exon118760   214   IV: 4199988-4200201 Caenorhabditis elegans
Exon118762   66   IV: 4201447-4201512 Caenorhabditis elegans
Exon118764   119   IV: 4201562-4201680 Caenorhabditis elegans
Exon118766   65   IV: 4201860-4201924 Caenorhabditis elegans
Exon118768   151   IV: 4202179-4202329 Caenorhabditis elegans
Exon118771   174   IV: 4203904-4204077 Caenorhabditis elegans
Exon118772   76   IV: 4204300-4204375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K06B9.5a.1 4198973 4204375 -1

1 Sequence

Length
1748

1 Sequence Ontology Term

Identifier Name Description
transcript