WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47C12.2.1 Sequence Name  F47C12.2.1
Length (nt)  10850   Chromosome Location  IV: 3989102-4014235
Chromosome . Primary Identifier  IV Chromosome Location . Start  3989102
Chromosome Location . End  4014235 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47C12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018547 clec-78 F47C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47C12.2 F47C12.2 10545   IV: 3989132-3989212

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47C12.2.1 3989102 4014235 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118223   111   IV: 3989102-3989212 Caenorhabditis elegans
Exon118224   273   IV: 3989543-3989815 Caenorhabditis elegans
Exon118225   523   IV: 3990405-3990927 Caenorhabditis elegans
Exon118226   129   IV: 3990974-3991102 Caenorhabditis elegans
Exon118227   143   IV: 3991298-3991440 Caenorhabditis elegans
Exon118255   80   IV: 3998737-3998816 Caenorhabditis elegans
Exon118256   464   IV: 3998889-3999352 Caenorhabditis elegans
Exon118257   183   IV: 3999402-3999584 Caenorhabditis elegans
Exon118258   366   IV: 3999629-3999994 Caenorhabditis elegans
Exon118259   288   IV: 4000053-4000340 Caenorhabditis elegans
Exon118260   449   IV: 4000391-4000839 Caenorhabditis elegans
Exon118261   301   IV: 4001127-4001427 Caenorhabditis elegans
Exon118262   742   IV: 4001477-4002218 Caenorhabditis elegans
Exon118263   466   IV: 4002278-4002743 Caenorhabditis elegans
Exon118264   379   IV: 4002789-4003167 Caenorhabditis elegans
Exon118265   201   IV: 4003217-4003417 Caenorhabditis elegans
Exon118266   483   IV: 4003481-4003963 Caenorhabditis elegans
Exon118267   802   IV: 4004018-4004819 Caenorhabditis elegans
Exon118268   158   IV: 4005104-4005261 Caenorhabditis elegans
Exon118279   111   IV: 4009271-4009381 Caenorhabditis elegans
Exon118280   2125   IV: 4009434-4011558 Caenorhabditis elegans
Exon118281   147   IV: 4011624-4011770 Caenorhabditis elegans
Exon118282   668   IV: 4011823-4012490 Caenorhabditis elegans
Exon118283   187   IV: 4012540-4012726 Caenorhabditis elegans
Exon118284   569   IV: 4012790-4013358 Caenorhabditis elegans
Exon118285   502   IV: 4013734-4014235 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47C12.2.1 3989102 4014235 1

1 Sequence

Length
10850

1 Sequence Ontology Term

Identifier Name Description
transcript