WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28F9.1.1 Sequence Name  F28F9.1.1
Length (nt)  2243   Chromosome Location  IV: 3855843-3861569
Chromosome . Primary Identifier  IV Chromosome Location . Start  3855843
Chromosome Location . End  3861569 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28F9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006970 zag-1 F28F9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28F9.1 F28F9.1 1791   IV: 3855850-3856008

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28F9.1.1 3855843 3861569 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117932   166   IV: 3855843-3856008 Caenorhabditis elegans
Exon117933   543   IV: 3856571-3857113 Caenorhabditis elegans
Exon117934   102   IV: 3857392-3857493 Caenorhabditis elegans
Exon117935   189   IV: 3857714-3857902 Caenorhabditis elegans
Exon117937   348   IV: 3859603-3859950 Caenorhabditis elegans
Exon117938   172   IV: 3860321-3860492 Caenorhabditis elegans
Exon117939   723   IV: 3860847-3861569 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28F9.1.1 3855843 3861569 1

1 Sequence

Length
2243

1 Sequence Ontology Term

Identifier Name Description
transcript