WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0212.1c.1 Sequence Name  B0212.1c.1
Length (nt)  2269   Chromosome Location  IV: 3570719-3577764
Chromosome . Primary Identifier  IV Chromosome Location . Start  3570719
Chromosome Location . End  3577764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0212.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015035 otpl-1 B0212.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0212.1c B0212.1c 1896   IV: 3571100-3571114

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0212.1c.1 3570719 3577764 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117355   187   IV: 3570719-3570905 Caenorhabditis elegans
Exon117357   67   IV: 3571048-3571114 Caenorhabditis elegans
Exon117359   57   IV: 3571381-3571437 Caenorhabditis elegans
Exon117361   128   IV: 3571492-3571619 Caenorhabditis elegans
Exon117365   124   IV: 3573556-3573679 Caenorhabditis elegans
Exon117368   105   IV: 3573791-3573895 Caenorhabditis elegans
Exon117371   139   IV: 3574079-3574217 Caenorhabditis elegans
Exon117374   271   IV: 3574267-3574537 Caenorhabditis elegans
Exon117377   176   IV: 3574993-3575168 Caenorhabditis elegans
Exon117380   87   IV: 3575254-3575340 Caenorhabditis elegans
Exon117384   200   IV: 3575515-3575714 Caenorhabditis elegans
Exon117387   243   IV: 3576050-3576292 Caenorhabditis elegans
Exon117390   175   IV: 3576883-3577057 Caenorhabditis elegans
Exon117392   310   IV: 3577455-3577764 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0212.1c.1 3570719 3577764 1

1 Sequence

Length
2269

1 Sequence Ontology Term

Identifier Name Description
transcript