WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M57.2a.1 Sequence Name  M57.2a.1
Length (nt)  1954   Chromosome Location  IV: 3527354-3532473
Chromosome . Primary Identifier  IV Chromosome Location . Start  3527354
Chromosome Location . End  3532473 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M57.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019778 M57.2 M57.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M57.2a M57.2a 1743   IV: 3527359-3527709

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:M57.2a.1 3527354 3532473 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117235   356   IV: 3527354-3527709 Caenorhabditis elegans
Exon117236   119   IV: 3527871-3527989 Caenorhabditis elegans
Exon117237   129   IV: 3528115-3528243 Caenorhabditis elegans
Exon117238   85   IV: 3528294-3528378 Caenorhabditis elegans
Exon117239   94   IV: 3528455-3528548 Caenorhabditis elegans
Exon117240   143   IV: 3528776-3528918 Caenorhabditis elegans
Exon117241   252   IV: 3530353-3530604 Caenorhabditis elegans
Exon117242   365   IV: 3531081-3531445 Caenorhabditis elegans
Exon117243   411   IV: 3532063-3532473 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:M57.2a.1 3527354 3532473 1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript