WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G12.9.1 Sequence Name  C09G12.9.1
Length (nt)  2135   Chromosome Location  IV: 3509631-3514567
Chromosome . Primary Identifier  IV Chromosome Location . Start  3509631
Chromosome Location . End  3514567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015658 tsg-101 C09G12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.9 C09G12.9 1278   IV: 3510474-3510604

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09G12.9.1 3509631 3514567 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117205   974   IV: 3509631-3510604 Caenorhabditis elegans
Exon117206   294   IV: 3511192-3511485 Caenorhabditis elegans
Exon117207   233   IV: 3512320-3512552 Caenorhabditis elegans
Exon117208   233   IV: 3513290-3513522 Caenorhabditis elegans
Exon117210   93   IV: 3514103-3514195 Caenorhabditis elegans
Exon117211   308   IV: 3514260-3514567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09G12.9.1 3509631 3514567 -1

1 Sequence

Length
2135

1 Sequence Ontology Term

Identifier Name Description
transcript