WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0546.5.1 Sequence Name  B0546.5.1
Length (nt)  1120   Chromosome Location  IV: 3387980-3390099
Chromosome . Primary Identifier  IV Chromosome Location . Start  3387980
Chromosome Location . End  3390099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0546.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015252 B0546.5 B0546.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0546.5 B0546.5 1038   IV: 3388050-3388288

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0546.5.1 3387980 3390099 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116975   309   IV: 3387980-3388288 Caenorhabditis elegans
Exon116976   108   IV: 3388748-3388855 Caenorhabditis elegans
Exon116977   91   IV: 3388908-3388998 Caenorhabditis elegans
Exon116978   96   IV: 3389114-3389209 Caenorhabditis elegans
Exon116979   96   IV: 3389320-3389415 Caenorhabditis elegans
Exon116980   180   IV: 3389532-3389711 Caenorhabditis elegans
Exon116981   240   IV: 3389860-3390099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0546.5.1 3387980 3390099 -1

1 Sequence

Length
1120

1 Sequence Ontology Term

Identifier Name Description
transcript