WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0546.3a.1 Sequence Name  B0546.3a.1
Length (nt)  2161   Chromosome Location  IV: 3378485-3382841
Chromosome . Primary Identifier  IV Chromosome Location . Start  3378485
Chromosome Location . End  3382841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0546.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015250 B0546.3 B0546.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0546.3a B0546.3a 1284   IV: 3379355-3379794

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0546.3a.1 3378485 3382841 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116956   1310   IV: 3378485-3379794 Caenorhabditis elegans
Exon116960   109   IV: 3380044-3380152 Caenorhabditis elegans
Exon116962   240   IV: 3380913-3381152 Caenorhabditis elegans
Exon116965   206   IV: 3381775-3381980 Caenorhabditis elegans
Exon116966   180   IV: 3382031-3382210 Caenorhabditis elegans
Exon116967   116   IV: 3382726-3382841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0546.3a.1 3378485 3382841 -1

1 Sequence

Length
2161

1 Sequence Ontology Term

Identifier Name Description
transcript