WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A6.9.1 Sequence Name  F42A6.9.1
Length (nt)  2862   Chromosome Location  IV: 3342515-3350027
Chromosome . Primary Identifier  IV Chromosome Location . Start  3342515
Chromosome Location . End  3350027 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018330 elks-1 F42A6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A6.9 F42A6.9 2511   IV: 3342757-3342928

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42A6.9.1 3342515 3350027 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116914   414   IV: 3342515-3342928 Caenorhabditis elegans
Exon116916   144   IV: 3344332-3344475 Caenorhabditis elegans
Exon116917   116   IV: 3344533-3344648 Caenorhabditis elegans
Exon116918   370   IV: 3345433-3345802 Caenorhabditis elegans
Exon116919   1033   IV: 3346075-3347107 Caenorhabditis elegans
Exon116920   109   IV: 3347488-3347596 Caenorhabditis elegans
Exon116921   190   IV: 3347645-3347834 Caenorhabditis elegans
Exon116922   246   IV: 3348923-3349168 Caenorhabditis elegans
Exon116923   121   IV: 3349304-3349424 Caenorhabditis elegans
Exon116924   119   IV: 3349909-3350027 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42A6.9.1 3342515 3350027 -1

1 Sequence

Length
2862

1 Sequence Ontology Term

Identifier Name Description
transcript