WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42A6.7b Sequence Name  F42A6.7b
Length (nt)  930   Chromosome Location  IV: 3337233-3337510
Chromosome . Primary Identifier  IV Chromosome Location . Start  3337233
Chromosome Location . End  3337510
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31510 HRPA-1, isoform b 32.4 309 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00095616
WBRNAi00047067
WBRNAi00075256
WBRNAi00075257
WBRNAi00066294
WBRNAi00066142
WBRNAi00083104
WBRNAi00028212
WBRNAi00061560
WBRNAi00080106
WBRNAi00008781
WBRNAi00080105
WBRNAi00025470
WBRNAi00066340
WBRNAi00080187
WBRNAi00064327
WBRNAi00069874

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F42A6.7b 3337233 3337510 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001999 hrpa-1 F42A6.7 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F42A6.7b 3337233 3337510 -1
CDS:F42A6.7b 3337560 3338211 -1

1 Sequence

Length
930

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A6.7b.1 F42A6.7b.1 1542   IV: 3336920-3338851
Transcript:F42A6.7b.2 F42A6.7b.2 1371   IV: 3336923-3338849
Transcript:F42A6.7b.3 F42A6.7b.3 1498   IV: 3336924-3338550
Transcript:F42A6.7b.4 F42A6.7b.4 1547   IV: 3336926-3338521