WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A6.7a.2 Sequence Name  F42A6.7a.2
Length (nt)  1555   Chromosome Location  IV: 3336920-3338867
Chromosome . Primary Identifier  IV Chromosome Location . Start  3336920
Chromosome Location . End  3338867 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A6.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001999 hrpa-1 F42A6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A6.7a F42A6.7a 1041   IV: 3337233-3337510

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42A6.7a.2 3336920 3338867 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116878   591   IV: 3336920-3337510 Caenorhabditis elegans
Exon116894   736   IV: 3337563-3338298 Caenorhabditis elegans
Exon116898   166   IV: 3338379-3338544 Caenorhabditis elegans
Exon116907   62   IV: 3338806-3338867 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42A6.7a.2 3336920 3338867 -1

1 Sequence

Length
1555

1 Sequence Ontology Term

Identifier Name Description
transcript