WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.29.1 Sequence Name  Y54G2A.29.1
Length (nt)  1846   Chromosome Location  IV: 3023403-3028942
Chromosome . Primary Identifier  IV Chromosome Location . Start  3023403
Chromosome Location . End  3028942 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.29.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021893 ndnf-1 Y54G2A.29 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.29 Y54G2A.29 1611   IV: 3023628-3023870

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.29.1 3023403 3028942 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116219   468   IV: 3023403-3023870 Caenorhabditis elegans
Exon116220   130   IV: 3024553-3024682 Caenorhabditis elegans
Exon116221   138   IV: 3024732-3024869 Caenorhabditis elegans
Exon116222   101   IV: 3025892-3025992 Caenorhabditis elegans
Exon116223   632   IV: 3027215-3027846 Caenorhabditis elegans
Exon116225   135   IV: 3028445-3028579 Caenorhabditis elegans
Exon116226   98   IV: 3028635-3028732 Caenorhabditis elegans
Exon116227   144   IV: 3028799-3028942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.29.1 3023403 3028942 -1

1 Sequence

Length
1846

1 Sequence Ontology Term

Identifier Name Description
transcript