WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.1.1 Sequence Name  Y54G2A.1.1
Length (nt)  1613   Chromosome Location  IV: 3019738-3023304
Chromosome . Primary Identifier  IV Chromosome Location . Start  3019738
Chromosome Location . End  3023304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003008 lin-22 Y54G2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.1 Y54G2A.1 522   IV: 3019740-3019808

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.1.1 3019738 3023304 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116216   71   IV: 3019738-3019808 Caenorhabditis elegans
Exon116217   93   IV: 3019906-3019998 Caenorhabditis elegans
Exon116218   1449   IV: 3021856-3023304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.1.1 3019738 3023304 1

1 Sequence

Length
1613

1 Sequence Ontology Term

Identifier Name Description
transcript