WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.3a.1 Sequence Name  Y54G2A.3a.1
Length (nt)  674   Chromosome Location  IV: 3012692-3014440
Chromosome . Primary Identifier  IV Chromosome Location . Start  3012692
Chromosome Location . End  3014440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021869 vrp-1 Y54G2A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.3a Y54G2A.3a 501   IV: 3012703-3012819

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.3a.1 3012692 3014440 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116210   128   IV: 3012692-3012819 Caenorhabditis elegans
Exon116211   78   IV: 3013850-3013927 Caenorhabditis elegans
Exon116213   468   IV: 3013973-3014440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.3a.1 3012692 3014440 1

1 Sequence

Length
674

1 Sequence Ontology Term

Identifier Name Description
transcript