WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.57.1 Sequence Name  Y54G2A.57.1
Length (nt)  1315   Chromosome Location  IV: 2969940-2973466
Chromosome . Primary Identifier  IV Chromosome Location . Start  2969940
Chromosome Location . End  2973466 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.57.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00189961 Y54G2A.57 Y54G2A.57 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.57 Y54G2A.57 1200   IV: 2970010-2970040

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.57.1 2969940 2973466 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116124   18   IV: 2969940-2969957 Caenorhabditis elegans
Exon116125   56   IV: 2969985-2970040 Caenorhabditis elegans
Exon116126   185   IV: 2970526-2970710 Caenorhabditis elegans
Exon116127   253   IV: 2970761-2971013 Caenorhabditis elegans
Exon116128   137   IV: 2971491-2971627 Caenorhabditis elegans
Exon116129   74   IV: 2971689-2971762 Caenorhabditis elegans
Exon116130   119   IV: 2971823-2971941 Caenorhabditis elegans
Exon116131   140   IV: 2971986-2972125 Caenorhabditis elegans
Exon116132   196   IV: 2972178-2972373 Caenorhabditis elegans
Exon116135   137   IV: 2973330-2973466 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.57.1 2969940 2973466 1

1 Sequence

Length
1315

1 Sequence Ontology Term

Identifier Name Description
transcript