WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.4.1 Sequence Name  Y54G2A.4.1
Length (nt)  1545   Chromosome Location  IV: 2931403-2936843
Chromosome . Primary Identifier  IV Chromosome Location . Start  2931403
Chromosome Location . End  2936843 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021870 samt-1 Y54G2A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.4 Y54G2A.4 1299   IV: 2931480-2931621

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.4.1 2931403 2936843 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116088   219   IV: 2931403-2931621 Caenorhabditis elegans
Exon116089   145   IV: 2932505-2932649 Caenorhabditis elegans
Exon116090   169   IV: 2933130-2933298 Caenorhabditis elegans
Exon116091   119   IV: 2934108-2934226 Caenorhabditis elegans
Exon116092   137   IV: 2934272-2934408 Caenorhabditis elegans
Exon116093   308   IV: 2935532-2935839 Caenorhabditis elegans
Exon116094   212   IV: 2936344-2936555 Caenorhabditis elegans
Exon116095   236   IV: 2936608-2936843 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.4.1 2931403 2936843 1

1 Sequence

Length
1545

1 Sequence Ontology Term

Identifier Name Description
transcript