WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.17a.3 Sequence Name  Y54G2A.17a.3
Length (nt)  1875   Chromosome Location  IV: 2872023-2882348
Chromosome . Primary Identifier  IV Chromosome Location . Start  2872023
Chromosome Location . End  2882348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.17a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021882 nprt-1 Y54G2A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.17a Y54G2A.17a 1629   IV: 2872224-2872301

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.17a.3 2872023 2882348 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115962   279   IV: 2872023-2872301 Caenorhabditis elegans
Exon115967   183   IV: 2873229-2873411 Caenorhabditis elegans
Exon115971   189   IV: 2875195-2875383 Caenorhabditis elegans
Exon115975   350   IV: 2879262-2879611 Caenorhabditis elegans
Exon115979   172   IV: 2880709-2880880 Caenorhabditis elegans
Exon115985   702   IV: 2881647-2882348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.17a.3 2872023 2882348 -1

1 Sequence

Length
1875

1 Sequence Ontology Term

Identifier Name Description
transcript