WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.6a.1 Sequence Name  Y54G2A.6a.1
Length (nt)  1434   Chromosome Location  IV: 2850886-2855456
Chromosome . Primary Identifier  IV Chromosome Location . Start  2850886
Chromosome Location . End  2855456 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021872 clec-85 Y54G2A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.6a Y54G2A.6a 843   IV: 2854390-2854475

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.6a.1 2850886 2855456 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115937   404   IV: 2850886-2851289 Caenorhabditis elegans
Exon115943   237   IV: 2854239-2854475 Caenorhabditis elegans
Exon115944   116   IV: 2854525-2854640 Caenorhabditis elegans
Exon115945   237   IV: 2854687-2854923 Caenorhabditis elegans
Exon115948   440   IV: 2855017-2855456 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.6a.1 2850886 2855456 1

1 Sequence

Length
1434

1 Sequence Ontology Term

Identifier Name Description
transcript