WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.40.1 Sequence Name  Y54G2A.40.1
Length (nt)  1946   Chromosome Location  IV: 2846476-2851282
Chromosome . Primary Identifier  IV Chromosome Location . Start  2846476
Chromosome Location . End  2851282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.40.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044495 Y54G2A.40 Y54G2A.40 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.40 Y54G2A.40 1878   IV: 2846544-2846607

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.40.1 2846476 2851282 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115928   132   IV: 2846476-2846607 Caenorhabditis elegans
Exon115929   197   IV: 2847207-2847403 Caenorhabditis elegans
Exon115930   118   IV: 2847460-2847577 Caenorhabditis elegans
Exon115931   599   IV: 2848048-2848646 Caenorhabditis elegans
Exon115933   79   IV: 2849728-2849806 Caenorhabditis elegans
Exon115934   113   IV: 2849853-2849965 Caenorhabditis elegans
Exon115935   117   IV: 2850013-2850129 Caenorhabditis elegans
Exon115936   591   IV: 2850692-2851282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.40.1 2846476 2851282 1

1 Sequence

Length
1946

1 Sequence Ontology Term

Identifier Name Description
transcript