WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.8a.1 Sequence Name  Y54G2A.8a.1
Length (nt)  1619   Chromosome Location  IV: 2835664-2838723
Chromosome . Primary Identifier  IV Chromosome Location . Start  2835664
Chromosome Location . End  2838723 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021873 clec-82 Y54G2A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.8a Y54G2A.8a 1395   IV: 2835680-2835771

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.8a.1 2835664 2838723 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115884   108   IV: 2835664-2835771 Caenorhabditis elegans
Exon115886   128   IV: 2835818-2835945 Caenorhabditis elegans
Exon115888   261   IV: 2836179-2836439 Caenorhabditis elegans
Exon115890   190   IV: 2836489-2836678 Caenorhabditis elegans
Exon115892   94   IV: 2836725-2836818 Caenorhabditis elegans
Exon115894   240   IV: 2837095-2837334 Caenorhabditis elegans
Exon115896   148   IV: 2837385-2837532 Caenorhabditis elegans
Exon115898   86   IV: 2837702-2837787 Caenorhabditis elegans
Exon115900   122   IV: 2837839-2837960 Caenorhabditis elegans
Exon115903   242   IV: 2838482-2838723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.8a.1 2835664 2838723 1

1 Sequence

Length
1619

1 Sequence Ontology Term

Identifier Name Description
transcript