WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.39b.1 Sequence Name  Y54G2A.39b.1
Length (nt)  1094   Chromosome Location  IV: 2825364-2828069
Chromosome . Primary Identifier  IV Chromosome Location . Start  2825364
Chromosome Location . End  2828069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.39b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043062 clec-80 Y54G2A.39 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.39b Y54G2A.39b 1029   IV: 2825376-2825476

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.39b.1 2825364 2828069 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115866   113   IV: 2825364-2825476 Caenorhabditis elegans
Exon115868   122   IV: 2825526-2825647 Caenorhabditis elegans
Exon115870   255   IV: 2826317-2826571 Caenorhabditis elegans
Exon115872   80   IV: 2826630-2826709 Caenorhabditis elegans
Exon115874   194   IV: 2827441-2827634 Caenorhabditis elegans
Exon115876   78   IV: 2827683-2827760 Caenorhabditis elegans
Exon115879   252   IV: 2827818-2828069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.39b.1 2825364 2828069 1

1 Sequence

Length
1094

1 Sequence Ontology Term

Identifier Name Description
transcript