WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.39a.1 Sequence Name  Y54G2A.39a.1
Length (nt)  935   Chromosome Location  IV: 2823746-2825647
Chromosome . Primary Identifier  IV Chromosome Location . Start  2823746
Chromosome Location . End  2825647 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.39a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043062 clec-80 Y54G2A.39 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.39a Y54G2A.39a 537   IV: 2823806-2823897

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.39a.1 2823746 2825647 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115860   152   IV: 2823746-2823897 Caenorhabditis elegans
Exon115862   125   IV: 2824182-2824306 Caenorhabditis elegans
Exon115864   536   IV: 2824941-2825476 Caenorhabditis elegans
Exon115867   122   IV: 2825526-2825647 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.39a.1 2823746 2825647 1

1 Sequence

Length
935

1 Sequence Ontology Term

Identifier Name Description
transcript