Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y54G2A.70 | Y54G2A.70 |
87
 |
IV: 2805622-2805708 |
Other
10 Allele
| Public Name |
|---|
| gk963722 |
| gk962726 |
| WBVar02122583 |
| WBVar02123242 |
| gk963754 |
| gk698675 |
| gk723570 |
| WBVar00570538 |
| gk196787 |
| WBVar01513677 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00201830 | 2805622 | 2805708 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_2804914..2805621 | 708 | IV: 2804914-2805621 | Caenorhabditis elegans |
1 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Protein coding genes with decreased expression in prg-1(wm161) comparing to in N2. | Cuffdiff and DEGseq were used to calculate the differential expression of protein-coding genes with and without the prg-1 mutation, and authors selected genes which had more than two-fold difference in expression (P < 0.05, q < 0.01 of Storey) from DEGseq outcomes. The intersection of genes which authors selected from DEGseq outcomes and genes which had more than two-fold difference in expression (P < 0.05) from Cuffdiff outcomes was defined as differentially expressed genes. | WBPaper00045316:prg-1_downregulated_L4 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_2805709..2805856 | 148 | IV: 2805709-2805856 | Caenorhabditis elegans |
