WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G2A.2c.1 Sequence Name  Y54G2A.2c.1
Length (nt)  885   Chromosome Location  IV: 2793429-2796600
Chromosome . Primary Identifier  IV Chromosome Location . Start  2793429
Chromosome Location . End  2796600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G2A.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021868 atln-1 Y54G2A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G2A.2c Y54G2A.2c 885   IV: 2793429-2793486

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.2c.1 2793429 2796600 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115769   58   IV: 2793429-2793486 Caenorhabditis elegans
Exon115772   150   IV: 2793757-2793906 Caenorhabditis elegans
Exon115775   266   IV: 2794478-2794743 Caenorhabditis elegans
Exon115778   240   IV: 2795654-2795893 Caenorhabditis elegans
Exon115781   171   IV: 2796430-2796600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G2A.2c.1 2793429 2796600 1

1 Sequence

Length
885

1 Sequence Ontology Term

Identifier Name Description
transcript