WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.4.1 Sequence Name  Y69A2AR.4.1
Length (nt)  1935   Chromosome Location  IV: 2618869-2625503
Chromosome . Primary Identifier  IV Chromosome Location . Start  2618869
Chromosome Location . End  2625503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004878 smf-3 Y69A2AR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.4 Y69A2AR.4 1683   IV: 2619891-2619998

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.4.1 2618869 2625503 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115433   100   IV: 2618869-2618968 Caenorhabditis elegans
Exon115435   122   IV: 2619877-2619998 Caenorhabditis elegans
Exon115436   350   IV: 2620593-2620942 Caenorhabditis elegans
Exon115438   163   IV: 2621462-2621624 Caenorhabditis elegans
Exon115440   132   IV: 2621688-2621819 Caenorhabditis elegans
Exon115442   159   IV: 2622433-2622591 Caenorhabditis elegans
Exon115444   222   IV: 2623089-2623310 Caenorhabditis elegans
Exon115446   144   IV: 2623857-2624000 Caenorhabditis elegans
Exon115448   83   IV: 2624053-2624135 Caenorhabditis elegans
Exon115450   160   IV: 2624610-2624769 Caenorhabditis elegans
Exon115452   48   IV: 2624831-2624878 Caenorhabditis elegans
Exon115454   252   IV: 2625252-2625503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.4.1 2618869 2625503 1

1 Sequence

Length
1935

1 Sequence Ontology Term

Identifier Name Description
transcript