Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y69A2AR.39 | Y69A2AR.39 |
76
 |
IV: 2495193-2495268 |
Other
8 Allele
| Public Name |
|---|
| gk963722 |
| gk963025 |
| gk962726 |
| gk964350 |
| WBVar01965299 |
| WBVar00270362 |
| gk361853 |
| gk382335 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00197723 | 2495193 | 2495268 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_2495175..2495192 | 18 | IV: 2495175-2495192 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Bacteria: E.faecalis strain OG1RF | Transcripts that showed significantly increased expression after infection by E. faecalis OG1RF. | Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. | WBPaper00059754:E.faecalis_OG1RF_upregulated |
| Bacteria: C.neoformans strain H99 | Transcripts that showed significantly increased expression after infection by C. neoformans H99. | Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. | WBPaper00059754:C.neoformans_H99_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_2495269..2495734 | 466 | IV: 2495269-2495734 | Caenorhabditis elegans |
