WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AR.12c.1 Sequence Name  Y38F2AR.12c.1
Length (nt)  2832   Chromosome Location  IV: 2399560-2409831
Chromosome . Primary Identifier  IV Chromosome Location . Start  2399560
Chromosome Location . End  2409831 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021430 Y38F2AR.12 Y38F2AR.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AR.12c Y38F2AR.12c 2832   IV: 2399560-2399619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.12c.1 2399560 2409831 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115065   60   IV: 2399560-2399619 Caenorhabditis elegans
Exon115068   121   IV: 2399828-2399948 Caenorhabditis elegans
Exon115071   320   IV: 2400271-2400590 Caenorhabditis elegans
Exon115074   480   IV: 2400906-2401385 Caenorhabditis elegans
Exon115077   168   IV: 2401717-2401884 Caenorhabditis elegans
Exon115079   333   IV: 2402468-2402800 Caenorhabditis elegans
Exon115082   102   IV: 2403051-2403152 Caenorhabditis elegans
Exon115088   572   IV: 2403911-2404482 Caenorhabditis elegans
Exon115091   268   IV: 2408137-2408404 Caenorhabditis elegans
Exon115095   190   IV: 2409377-2409566 Caenorhabditis elegans
Exon115096   218   IV: 2409614-2409831 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.12c.1 2399560 2409831 -1

1 Sequence

Length
2832

1 Sequence Ontology Term

Identifier Name Description
transcript