WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AR.5b.1 Sequence Name  Y38F2AR.5b.1
Length (nt)  3042   Chromosome Location  IV: 2349271-2376003
Chromosome . Primary Identifier  IV Chromosome Location . Start  2349271
Chromosome Location . End  2376003 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021423 tftc-1 Y38F2AR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AR.5b Y38F2AR.5b 3042   IV: 2349271-2349319

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.5b.1 2349271 2376003 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114972   49   IV: 2349271-2349319 Caenorhabditis elegans
Exon114974   62   IV: 2349371-2349432 Caenorhabditis elegans
Exon114976   145   IV: 2349500-2349644 Caenorhabditis elegans
Exon114978   122   IV: 2349708-2349829 Caenorhabditis elegans
Exon114981   140   IV: 2351509-2351648 Caenorhabditis elegans
Exon114983   128   IV: 2351752-2351879 Caenorhabditis elegans
Exon114985   143   IV: 2352925-2353067 Caenorhabditis elegans
Exon114987   102   IV: 2353302-2353403 Caenorhabditis elegans
Exon114989   282   IV: 2355021-2355302 Caenorhabditis elegans
Exon114992   148   IV: 2357635-2357782 Caenorhabditis elegans
Exon114994   175   IV: 2358815-2358989 Caenorhabditis elegans
Exon114996   211   IV: 2361463-2361673 Caenorhabditis elegans
Exon114998   227   IV: 2364734-2364960 Caenorhabditis elegans
Exon115006   241   IV: 2371544-2371784 Caenorhabditis elegans
Exon115008   206   IV: 2372640-2372845 Caenorhabditis elegans
Exon115010   160   IV: 2373110-2373269 Caenorhabditis elegans
Exon115012   321   IV: 2374177-2374497 Caenorhabditis elegans
Exon115014   180   IV: 2375824-2376003 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.5b.1 2349271 2376003 1

1 Sequence

Length
3042

1 Sequence Ontology Term

Identifier Name Description
transcript