WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AR.5a Sequence Name  Y38F2AR.5a
Length (nt)  4116   Chromosome Location  IV: 2349271-2349319
Chromosome . Primary Identifier  IV Chromosome Location . Start  2349271
Chromosome Location . End  2349319
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48693 TFTC-1, isoform a 157.6 1371 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00056049
WBRNAi00056051
WBRNAi00056052
WBRNAi00056053
WBRNAi00020303
WBRNAi00020304
WBRNAi00020305

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.5a 2349271 2349319 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021423 tftc-1 Y38F2AR.5 Caenorhabditis elegans

21 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.5a 2349271 2349319 1
CDS:Y38F2AR.5a 2349371 2349432 1
CDS:Y38F2AR.5a 2349500 2349644 1
CDS:Y38F2AR.5a 2349708 2349829 1
CDS:Y38F2AR.5a 2351509 2351648 1
CDS:Y38F2AR.5a 2351752 2351879 1
CDS:Y38F2AR.5a 2352925 2353067 1
CDS:Y38F2AR.5a 2353302 2353403 1
CDS:Y38F2AR.5a 2355021 2355302 1
CDS:Y38F2AR.5a 2357635 2357782 1
CDS:Y38F2AR.5a 2358815 2358989 1
CDS:Y38F2AR.5a 2361463 2361673 1
CDS:Y38F2AR.5a 2364734 2364960 1
CDS:Y38F2AR.5a 2371544 2371784 1
CDS:Y38F2AR.5a 2372640 2372845 1
CDS:Y38F2AR.5a 2373110 2373269 1
CDS:Y38F2AR.5a 2374177 2374497 1
CDS:Y38F2AR.5a 2375824 2376002 1
CDS:Y38F2AR.5a 2378269 2379002 1
CDS:Y38F2AR.5a 2380982 2381118 1
CDS:Y38F2AR.5a 2381739 2381942 1

1 Sequence

Length
4116

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AR.5a.1 Y38F2AR.5a.1 5215   IV: 2349271-2383041