WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AR.7.2 Sequence Name  Y38F2AR.7.2
Length (nt)  2374   Chromosome Location  IV: 2333839-2348912
Chromosome . Primary Identifier  IV Chromosome Location . Start  2333839
Chromosome Location . End  2348912 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021425 ppgn-1 Y38F2AR.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AR.7 Y38F2AR.7 2244   IV: 2333968-2334099

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.7.2 2333839 2348912 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114952   261   IV: 2333839-2334099 Caenorhabditis elegans
Exon114954   390   IV: 2334696-2335085 Caenorhabditis elegans
Exon114956   270   IV: 2338183-2338452 Caenorhabditis elegans
Exon114958   239   IV: 2339715-2339953 Caenorhabditis elegans
Exon114960   280   IV: 2342529-2342808 Caenorhabditis elegans
Exon114962   259   IV: 2345055-2345313 Caenorhabditis elegans
Exon114964   141   IV: 2347484-2347624 Caenorhabditis elegans
Exon114966   361   IV: 2348204-2348564 Caenorhabditis elegans
Exon114968   63   IV: 2348691-2348753 Caenorhabditis elegans
Exon114970   110   IV: 2348803-2348912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.7.2 2333839 2348912 -1

1 Sequence

Length
2374

1 Sequence Ontology Term

Identifier Name Description
transcript