WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AR.7.1 Sequence Name  Y38F2AR.7.1
Length (nt)  2376   Chromosome Location  IV: 2333837-2348912
Chromosome . Primary Identifier  IV Chromosome Location . Start  2333837
Chromosome Location . End  2348912 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021425 ppgn-1 Y38F2AR.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AR.7 Y38F2AR.7 2244   IV: 2333968-2334099

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.7.1 2333837 2348912 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114951   263   IV: 2333837-2334099 Caenorhabditis elegans
Exon114953   390   IV: 2334696-2335085 Caenorhabditis elegans
Exon114955   270   IV: 2338183-2338452 Caenorhabditis elegans
Exon114957   239   IV: 2339715-2339953 Caenorhabditis elegans
Exon114959   280   IV: 2342529-2342808 Caenorhabditis elegans
Exon114961   259   IV: 2345055-2345313 Caenorhabditis elegans
Exon114963   141   IV: 2347484-2347624 Caenorhabditis elegans
Exon114965   361   IV: 2348204-2348564 Caenorhabditis elegans
Exon114967   63   IV: 2348691-2348753 Caenorhabditis elegans
Exon114969   110   IV: 2348803-2348912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AR.7.1 2333837 2348912 -1

1 Sequence

Length
2376

1 Sequence Ontology Term

Identifier Name Description
transcript