WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AL.5.1 Sequence Name  Y38F2AL.5.1
Length (nt)  920   Chromosome Location  IV: 2327126-2329640
Chromosome . Primary Identifier  IV Chromosome Location . Start  2327126
Chromosome Location . End  2329640 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AL.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021417 nhr-236 Y38F2AL.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AL.5 Y38F2AL.5 852   IV: 2327166-2327395

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AL.5.1 2327126 2329640 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114941   270   IV: 2327126-2327395 Caenorhabditis elegans
Exon114942   105   IV: 2327585-2327689 Caenorhabditis elegans
Exon114943   76   IV: 2327738-2327813 Caenorhabditis elegans
Exon114944   197   IV: 2327862-2328058 Caenorhabditis elegans
Exon114945   180   IV: 2328524-2328703 Caenorhabditis elegans
Exon114946   92   IV: 2329549-2329640 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AL.5.1 2327126 2329640 -1

1 Sequence

Length
920

1 Sequence Ontology Term

Identifier Name Description
transcript