WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F2AL.3a.1 Sequence Name  Y38F2AL.3a.1
Length (nt)  1619   Chromosome Location  IV: 2307815-2314567
Chromosome . Primary Identifier  IV Chromosome Location . Start  2307815
Chromosome Location . End  2314567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AL.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006920 vha-11 Y38F2AL.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F2AL.3a Y38F2AL.3a 1155   IV: 2308246-2308341

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AL.3a.1 2307815 2314567 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114897   527   IV: 2307815-2308341 Caenorhabditis elegans
Exon114898   272   IV: 2309523-2309794 Caenorhabditis elegans
Exon114899   209   IV: 2310963-2311171 Caenorhabditis elegans
Exon114900   286   IV: 2312624-2312909 Caenorhabditis elegans
Exon114902   86   IV: 2313791-2313876 Caenorhabditis elegans
Exon114904   68   IV: 2313932-2313999 Caenorhabditis elegans
Exon114907   171   IV: 2314397-2314567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F2AL.3a.1 2307815 2314567 -1

1 Sequence

Length
1619

1 Sequence Ontology Term

Identifier Name Description
transcript