WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T04C4.1a.1 Sequence Name  T04C4.1a.1
Length (nt)  3148   Chromosome Location  IV: 2222830-2235844
Chromosome . Primary Identifier  IV Chromosome Location . Start  2222830
Chromosome Location . End  2235844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T04C4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020208 fnip-2 T04C4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04C4.1a T04C4.1a 2868   IV: 2222965-2223016

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T04C4.1a.1 2222830 2235844 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114784   76   IV: 2222830-2222905 Caenorhabditis elegans
Exon114785   61   IV: 2222956-2223016 Caenorhabditis elegans
Exon114788   282   IV: 2223717-2223998 Caenorhabditis elegans
Exon114790   145   IV: 2224298-2224442 Caenorhabditis elegans
Exon114792   255   IV: 2225165-2225419 Caenorhabditis elegans
Exon114796   395   IV: 2227080-2227474 Caenorhabditis elegans
Exon114798   158   IV: 2228258-2228415 Caenorhabditis elegans
Exon114800   272   IV: 2229023-2229294 Caenorhabditis elegans
Exon114803   311   IV: 2229796-2230106 Caenorhabditis elegans
Exon114805   269   IV: 2230694-2230962 Caenorhabditis elegans
Exon114807   251   IV: 2231416-2231666 Caenorhabditis elegans
Exon114809   343   IV: 2233564-2233906 Caenorhabditis elegans
Exon114811   330   IV: 2235515-2235844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T04C4.1a.1 2222830 2235844 1

1 Sequence

Length
3148

1 Sequence Ontology Term

Identifier Name Description
transcript