WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C12.3.1 Sequence Name  F52C12.3.1
Length (nt)  1239   Chromosome Location  IV: 1948191-1953325
Chromosome . Primary Identifier  IV Chromosome Location . Start  1948191
Chromosome Location . End  1953325 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018680 tsen-54 F52C12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C12.3 F52C12.3 1008   IV: 1948198-1948226

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52C12.3.1 1948191 1953325 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114430   36   IV: 1948191-1948226 Caenorhabditis elegans
Exon114431   151   IV: 1948797-1948947 Caenorhabditis elegans
Exon114432   149   IV: 1949089-1949237 Caenorhabditis elegans
Exon114433   182   IV: 1949529-1949710 Caenorhabditis elegans
Exon114434   89   IV: 1952387-1952475 Caenorhabditis elegans
Exon114435   137   IV: 1952545-1952681 Caenorhabditis elegans
Exon114436   135   IV: 1952736-1952870 Caenorhabditis elegans
Exon114437   360   IV: 1952966-1953325 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52C12.3.1 1948191 1953325 1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript