WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A8.2a.1 Sequence Name  F55A8.2a.1
Length (nt)  3000   Chromosome Location  IV: 1848071-1880596
Chromosome . Primary Identifier  IV Chromosome Location . Start  1848071
Chromosome Location . End  1880596 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001173 egl-4 F55A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A8.2a F55A8.2a 2343   IV: 1848071-1848226

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A8.2a.1 1848071 1880596 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114159   156   IV: 1848071-1848226 Caenorhabditis elegans
Exon114163   168   IV: 1860836-1861003 Caenorhabditis elegans
Exon114169   236   IV: 1862683-1862918 Caenorhabditis elegans
Exon114175   167   IV: 1864120-1864286 Caenorhabditis elegans
Exon114181   97   IV: 1865373-1865469 Caenorhabditis elegans
Exon114188   124   IV: 1871764-1871887 Caenorhabditis elegans
Exon114197   108   IV: 1873585-1873692 Caenorhabditis elegans
Exon114207   557   IV: 1875651-1876207 Caenorhabditis elegans
Exon114214   634   IV: 1877187-1877820 Caenorhabditis elegans
Exon114230   753   IV: 1879844-1880596 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A8.2a.1 1848071 1880596 1

1 Sequence

Length
3000

1 Sequence Ontology Term

Identifier Name Description
transcript