WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1BA.3.1 Sequence Name  Y38C1BA.3.1
Length (nt)  1145   Chromosome Location  IV: 1817392-1820253
Chromosome . Primary Identifier  IV Chromosome Location . Start  1817392
Chromosome Location . End  1820253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1BA.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1BA.3 Y38C1BA.3 876   IV: 1817658-1817722

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1BA.3.1 1817392 1820253 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114132   331   IV: 1817392-1817722 Caenorhabditis elegans
Exon114133   652   IV: 1818404-1819055 Caenorhabditis elegans
Exon114134   80   IV: 1819238-1819317 Caenorhabditis elegans
Exon114135   82   IV: 1820172-1820253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1BA.3.1 1817392 1820253 -1

1 Sequence

Length
1145

1 Sequence Ontology Term

Identifier Name Description
transcript