WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4A.5.3 Sequence Name  Y41D4A.5.3
Length (nt)  2505   Chromosome Location  IV: 1730090-1737891
Chromosome . Primary Identifier  IV Chromosome Location . Start  1730090
Chromosome Location . End  1737891 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4A.5.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021507 ptpn-22 Y41D4A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4A.5 Y41D4A.5 1410   IV: 1731159-1731506

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y41D4A.5.3 1730090 1737891 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113995   1417   IV: 1730090-1731506 Caenorhabditis elegans
Exon114000   511   IV: 1732962-1733472 Caenorhabditis elegans
Exon114003   139   IV: 1735816-1735954 Caenorhabditis elegans
Exon114006   109   IV: 1736678-1736786 Caenorhabditis elegans
Exon114009   176   IV: 1737471-1737646 Caenorhabditis elegans
Exon114012   79   IV: 1737692-1737770 Caenorhabditis elegans
Exon114015   74   IV: 1737818-1737891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y41D4A.5.3 1730090 1737891 -1

1 Sequence

Length
2505

1 Sequence Ontology Term

Identifier Name Description
transcript