WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y104H12A.1b.1 Sequence Name  Y104H12A.1b.1
Length (nt)  1644   Chromosome Location  IV: 1388097-1399206
Chromosome . Primary Identifier  IV Chromosome Location . Start  1388097
Chromosome Location . End  1399206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y104H12A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022423 nhr-41 Y104H12A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y104H12A.1b Y104H12A.1b 1644   IV: 1388097-1388150

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y104H12A.1b.1 1388097 1399206 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113434   54   IV: 1388097-1388150 Caenorhabditis elegans
Exon113437   96   IV: 1388608-1388703 Caenorhabditis elegans
Exon113441   195   IV: 1393881-1394075 Caenorhabditis elegans
Exon113446   112   IV: 1394544-1394655 Caenorhabditis elegans
Exon113451   475   IV: 1395403-1395877 Caenorhabditis elegans
Exon113456   278   IV: 1396803-1397080 Caenorhabditis elegans
Exon113461   202   IV: 1398129-1398330 Caenorhabditis elegans
Exon113465   232   IV: 1398975-1399206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y104H12A.1b.1 1388097 1399206 1

1 Sequence

Length
1644

1 Sequence Ontology Term

Identifier Name Description
transcript