WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H1.1c.1 Sequence Name  F53H1.1c.1
Length (nt)  2502   Chromosome Location  IV: 1297400-1309644
Chromosome . Primary Identifier  IV Chromosome Location . Start  1297400
Chromosome Location . End  1309644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H1.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018776 ddx-46 F53H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H1.1c F53H1.1c 2502   IV: 1297400-1297447

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53H1.1c.1 1297400 1309644 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113312   48   IV: 1297400-1297447 Caenorhabditis elegans
Exon113315   299   IV: 1297586-1297884 Caenorhabditis elegans
Exon113319   370   IV: 1298985-1299354 Caenorhabditis elegans
Exon113322   218   IV: 1300556-1300773 Caenorhabditis elegans
Exon113326   160   IV: 1301935-1302094 Caenorhabditis elegans
Exon113330   276   IV: 1303064-1303339 Caenorhabditis elegans
Exon113334   120   IV: 1303411-1303530 Caenorhabditis elegans
Exon113338   201   IV: 1304386-1304586 Caenorhabditis elegans
Exon113344   554   IV: 1307909-1308462 Caenorhabditis elegans
Exon113347   256   IV: 1309389-1309644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53H1.1c.1 1297400 1309644 -1

1 Sequence

Length
2502

1 Sequence Ontology Term

Identifier Name Description
transcript